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  5. Sobic.004G270400.1

Sobic.004G270400.1


Description : polyamine transporter *(PUT) & amino acid transporter *(LAT)


Gene families : OG_42_0001508 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G270400.1
Cluster HCAA Clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
96930 No alias Amino acid permease family protein 0.03 Orthogroups_2024-Update
A4A49_29714 No alias putative polyamine transporter 0.02 Orthogroups_2024-Update
At3g19553 No alias PUT5 [Source:UniProtKB/TrEMBL;Acc:A0A178VGC5] 0.03 Orthogroups_2024-Update
LOC_Os12g39080 No alias amino acid permease family protein, putative, expressed 0.05 Orthogroups_2024-Update
PSME_00056287-RA No alias (at1g31830 : 696.0) Amino acid permease family protein;... 0.02 Orthogroups_2024-Update
Seita.3G365700.1 No alias amino acid transporter *(LAT) 0.04 Orthogroups_2024-Update
Sopen01g053840 No alias Amino acid permease 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 97 474
No external refs found!