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  5. Sobic.004G344901.1

Sobic.004G344901.1


Description : class XI myosin microfilament-based motor protein


Gene families : OG_42_0000130 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000130_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G344901.1
Cluster HCAA Clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
A4A49_31463 No alias myosin-12 0.02 Orthogroups_2024-Update
Bradi3g29440 No alias myosin 1 0.03 Orthogroups_2024-Update
Glyma.10G041700 No alias myosin 2 0.03 Orthogroups_2024-Update
Glyma.13G128700 No alias myosin 2 0.03 Orthogroups_2024-Update
LOC_Os10g34710 No alias myosin-2 heavy chain, non muscle, putative, expressed 0.03 Orthogroups_2024-Update
Mp3g23480.1 No alias class VIII myosin microfilament-based motor protein 0.02 Orthogroups_2024-Update
PSME_00001240-RA No alias (at1g08730 : 1499.0) Class XI myosin gene; XIC; CONTAINS... 0.03 Orthogroups_2024-Update
Potri.002G041800 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Potri.006G220000 No alias myosin, putative 0.02 Orthogroups_2024-Update
Seita.1G365500.1 No alias class XI myosin microfilament-based motor protein 0.05 Orthogroups_2024-Update
Seita.2G114600.1 No alias class XI myosin microfilament-based motor protein 0.04 Orthogroups_2024-Update
Seita.9G254000.1 No alias class XI myosin microfilament-based motor protein 0.02 Orthogroups_2024-Update
Sopen07g020410 No alias DIL domain 0.02 Orthogroups_2024-Update
evm.model.tig00000056.26 No alias (at2g20290 : 520.0) member of Myosin-like proteins;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016459 myosin complex IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002710 Dilute_dom 1343 1446
IPR001609 Myosin_head_motor_dom 73 729
IPR000048 IQ_motif_EF-hand-BS 865 884
IPR000048 IQ_motif_EF-hand-BS 841 860
IPR000048 IQ_motif_EF-hand-BS 817 835
IPR000048 IQ_motif_EF-hand-BS 768 788
IPR000048 IQ_motif_EF-hand-BS 794 812
IPR004009 Myosin_N 18 61
No external refs found!