1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.004G352100.1

Sobic.004G352100.1


Description : AHL clade-B transcription factor


Gene families : OG_42_0000248 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G352100.1
Cluster HCAA Clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G219600 No alias AT hook motif DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.03G011200 No alias AT hook motif DNA-binding family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G051150.7 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G122340.5 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
LOC_Os06g22030 No alias AT hook motif domain containing protein, expressed 0.04 Orthogroups_2024-Update
Mp8g14640.1 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Seita.4G141100.1 No alias AHL clade-B transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G249000.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 216 329
No external refs found!