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  5. Sobic.004G353700.1

Sobic.004G353700.1


Description : Unknown function


Gene families : OG_42_0000507 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000507_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G353700.1
Cluster HCAA Clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
At1g03610 No alias Plant/protein (DUF789) [Source:UniProtKB/TrEMBL;Acc:Q8LF98] 0.04 Orthogroups_2024-Update
At5g23380 No alias Gb [Source:UniProtKB/TrEMBL;Acc:Q9FGE1] 0.04 Orthogroups_2024-Update
Bradi3g29840 No alias Protein of unknown function (DUF789) 0.03 Orthogroups_2024-Update
Brara.B03032.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H02452.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.09G040300 No alias Protein of unknown function (DUF789) 0.03 Orthogroups_2024-Update
HORVU6Hr1G093680.21 No alias Unknown function 0.07 Orthogroups_2024-Update
LOC_Os02g58100 No alias expressed protein 0.04 Orthogroups_2024-Update
LOC_Os10g35150 No alias expressed protein 0.03 Orthogroups_2024-Update
PSME_00044496-RA No alias (at1g03610 : 282.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
Pp1s26_3V6 No alias F9H3.4; expressed protein [Arabidopsis thaliana] 0.05 Orthogroups_2024-Update
Pp1s36_242V6 No alias F21B7.22; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.9G207600.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Solyc01g016510 No alias No description available 0.02 Orthogroups_2024-Update
Solyc05g008920 No alias DUF789 family protein (AHRD V3.3 *** G7KMK8_MEDTR) 0.03 Orthogroups_2024-Update
Solyc10g008480 No alias Plant/F9H3-4 protein (AHRD V3.3 *** A0A072VLR0_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008507 DUF789 6 319
No external refs found!