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Description : RNA polymerase-IV/V auxiliary factor *(RDM4)
Gene families : OG_42_0007638 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007638_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.005G009200.1 | |
| Cluster | HCAA Clusters: Cluster_234 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Seita.8G016300.1 | No alias | RNA polymerase-IV/V auxiliary factor *(RDM4) | 0.02 | Orthogroups_2024-Update | |
| Solyc06g082390 | No alias | RNA-directed DNA methylation 4 (AHRD V3.3 *** AT2G30280.1) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | Predicted GO |
| MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Predicted GO |
| CC | GO:0005694 | chromosome | IEP | Predicted GO |
| BP | GO:0006338 | chromatin remodeling | IEP | Predicted GO |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
| BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
| BP | GO:0006906 | vesicle fusion | IEP | Predicted GO |
| BP | GO:0006996 | organelle organization | IEP | Predicted GO |
| BP | GO:0008104 | protein localization | IEP | Predicted GO |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Predicted GO |
| BP | GO:0015031 | protein transport | IEP | Predicted GO |
| BP | GO:0015833 | peptide transport | IEP | Predicted GO |
| BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
| BP | GO:0016050 | vesicle organization | IEP | Predicted GO |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
| CC | GO:0016592 | mediator complex | IEP | Predicted GO |
| BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
| BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Predicted GO |
| BP | GO:0042886 | amide transport | IEP | Predicted GO |
| BP | GO:0043248 | proteasome assembly | IEP | Predicted GO |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
| BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
| BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
| BP | GO:0048280 | vesicle fusion with Golgi apparatus | IEP | Predicted GO |
| BP | GO:0048284 | organelle fusion | IEP | Predicted GO |
| BP | GO:0051641 | cellular localization | IEP | Predicted GO |
| BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
| MF | GO:0060090 | molecular adaptor activity | IEP | Predicted GO |
| BP | GO:0061024 | membrane organization | IEP | Predicted GO |
| BP | GO:0061025 | membrane fusion | IEP | Predicted GO |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
| BP | GO:0090174 | organelle membrane fusion | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |