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  5. Sobic.005G022200.4

Sobic.005G022200.4


Description : Unknown function


Gene families : OG_42_0000619 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000619_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G022200.4
Cluster HCAA Clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Bradi2g56440 No alias 5\'-3\' exoribonuclease 3 0.02 Orthogroups_2024-Update
Mp3g08820.1 No alias exoribonuclease (RAT1/XRN2) 0.02 Orthogroups_2024-Update
Seita.9G057500.1 No alias exoribonuclease *(XRN4) 0.04 Orthogroups_2024-Update
evm.model.tig00000241.176 No alias (at1g75660 : 219.0) Encodes a protein with similarity to... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0004527 exonuclease activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004859 Put_53exo 1 247
No external refs found!