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  5. Sobic.005G034000.1

Sobic.005G034000.1


Description : Unknown function


Gene families : OG_42_0000532 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G034000.1
Cluster HCAA Clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
A4A49_41896 No alias stem-specific protein tsjt1 0.03 Orthogroups_2024-Update
Brara.B00803.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.13G207800 No alias Aluminium induced protein with YGL and LRDR motifs 0.03 Orthogroups_2024-Update
Glyma.13G240300 No alias Aluminium induced protein with YGL and LRDR motifs 0.03 Orthogroups_2024-Update
HORVU5Hr1G094370.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os04g58280 No alias stem-specific protein TSJT1, putative, expressed 0.03 Orthogroups_2024-Update
Sobic.001G093900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G269200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen01g031640 No alias Aluminium induced protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR024286 DUF3700 2 228
No external refs found!