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  5. Sobic.005G124600.1

Sobic.005G124600.1


Description : iron chelator transporter *(YSL) & ferric cation-chelator transporter *(YSL)


Gene families : OG_42_0000320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G124600.1
Cluster HCAA Clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
At5g53550 No alias YSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178U7D6] 0.03 Orthogroups_2024-Update
PSME_00004864-RA No alias (at1g65730 : 904.0) Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00016946-RA No alias (at1g65730 : 860.0) Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
Seita.7G075900.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
Seita.7G172800.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0061666 UFM1 ligase activity IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
MF GO:0071568 UFM1 transferase activity IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 74 694
No external refs found!