1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.005G139700.2

Sobic.005G139700.2


Description : NADPH-oxidase *(Rboh)


Gene families : OG_42_0000215 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G139700.2
Cluster HCAA Clusters: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Brara.B01052.1 No alias NADPH-oxidase *(Rboh) 0.03 Orthogroups_2024-Update
Brara.C01498.1 No alias NADPH-oxidase *(Rboh) 0.03 Orthogroups_2024-Update
Brara.F01411.1 No alias NADPH-oxidase *(Rboh) 0.02 Orthogroups_2024-Update
Brara.F03043.1 No alias NADPH-oxidase *(Rboh) 0.03 Orthogroups_2024-Update
Brara.I05278.1 No alias NADPH-oxidase *(Rboh) 0.03 Orthogroups_2024-Update
GRMZM2G037993 No alias respiratory burst oxidase homologue D 0.09 Orthogroups_2024-Update
GRMZM2G358619 No alias respiratory burst oxidase homologue D 0.05 Orthogroups_2024-Update
GRMZM2G441541 No alias respiratory burst oxidase homologue D 0.03 Orthogroups_2024-Update
Glyma.03G236300 No alias respiratory burst oxidase homolog B 0.03 Orthogroups_2024-Update
Glyma.05G212500 No alias respiratory burst oxidase protein F 0.03 Orthogroups_2024-Update
Glyma.15G182000 No alias Riboflavin synthase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.20G236200 No alias respiratory burst oxidase homolog B 0.03 Orthogroups_2024-Update
Kfl00091_0200 kfl00091_0200_v1.1 (at5g51060 : 374.0) RHD2 (along with RHD3 and RHD4) is... 0.02 Orthogroups_2024-Update
MA_10427209g0020 No alias (at1g64060 : 925.0) Interacts with AtrbohD gene to fine... 0.03 Orthogroups_2024-Update
Potri.006G137300 No alias Riboflavin synthase-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.6G075000.1 No alias NADPH-oxidase *(Rboh) 0.03 Orthogroups_2024-Update
Seita.8G141900.1 No alias NADPH-oxidase *(Rboh) 0.03 Orthogroups_2024-Update
Sobic.009G206500.1 No alias respiratory burst NADPH oxidase *(SGN4) & NADPH-oxidase *(Rboh) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA 16Dec
MF GO:0016491 oxidoreductase activity IEA 16Dec
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013130 Fe3_Rdtase_TM_dom 563 722
IPR013121 Fe_red_NAD-bd_6 891 1061
IPR013112 FAD-bd_8 766 884
IPR013623 NADPH_Ox 304 400
No external refs found!