Sobic.005G222200.1


Description : subunit alpha of ATP-dependent citrate lyase complex


Gene families : OG_42_0002348 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002348_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G222200.1
Cluster HCAA Clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Bradi4g04390 No alias ATP-citrate lyase A-3 0.03 Orthogroups_2024-Update
LOC_Os11g47330 No alias ATP-grasp domain containing protein, expressed 0.02 Orthogroups_2024-Update
Mp5g21210.1 No alias alpha chain of ATP-dependent citrate lyase complex 0.04 Orthogroups_2024-Update
PSME_00046411-RA No alias (at1g09430 : 226.0) Encodes subunit A of the heteromeric... 0.03 Orthogroups_2024-Update
Pp1s63_54V6 No alias at1g09430 f19j9_9 0.04 Orthogroups_2024-Update
Pp1s7_156V6 No alias atp citrate lyase b-subunit 0.02 Orthogroups_2024-Update
Seita.3G332700.1 No alias subunit alpha of ATP-dependent citrate lyase complex 0.07 Orthogroups_2024-Update
Solyc01g101040 No alias ATP-citrate synthase, putative (AHRD V3.3 *** B9RFP8_RICCO) 0.03 Orthogroups_2024-Update
Solyc05g005160 No alias ATP-citrate synthase, putative (AHRD V3.3 *** B9SHC9_RICCO) 0.03 Orthogroups_2024-Update
Sopen05g001170 No alias ATP-grasp domain 0.03 Orthogroups_2024-Update
evm.model.tig00000829.4 No alias (at1g60810 : 446.0) One of the three genes encoding... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006096 glycolytic process IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006757 ATP generation from ADP IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009166 nucleotide catabolic process IEP Predicted GO
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0042866 pyruvate biosynthetic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0046031 ADP metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0046939 nucleotide phosphorylation IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013650 ATP-grasp_succ-CoA_synth-type 6 203
IPR032263 Citrate-bd 241 417
No external refs found!