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  5. Sobic.005G226100.1

Sobic.005G226100.1


Description : C2H2-type subclass ZAT transcription factor


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G226100.1
Cluster HCAA Clusters: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
A4A49_41461 No alias zinc finger protein zat10 0.02 Orthogroups_2024-Update
At3g19580 No alias ZF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ97] 0.04 Orthogroups_2024-Update
At3g49930 No alias At3g49930 [Source:UniProtKB/TrEMBL;Acc:Q9SN24] 0.04 Orthogroups_2024-Update
At3g53600 No alias At3g53600 [Source:UniProtKB/TrEMBL;Acc:Q9LFG0] 0.02 Orthogroups_2024-Update
At5g04340 No alias Zinc finger protein ZAT6 [Source:UniProtKB/Swiss-Prot;Acc:O22533] 0.02 Orthogroups_2024-Update
At5g04390 No alias C2H2-type zinc finger family protein... 0.03 Orthogroups_2024-Update
At5g59820 No alias Zinc finger protein ZAT12... 0.03 Orthogroups_2024-Update
Brara.J01350.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G035103 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
GRMZM2G113860 No alias zinc-finger protein 2 0.03 Orthogroups_2024-Update
GRMZM2G361210 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
Glyma.10G045200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G174000 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os03g60570 No alias ZOS3-22 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
MA_70076g0010 No alias (at1g02040 : 115.0) C2H2-type zinc finger family... 0.03 Orthogroups_2024-Update
MA_9316262g0010 No alias (at2g45120 : 86.3) C2H2-like zinc finger protein;... 0.03 Orthogroups_2024-Update
PSME_00015139-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00056418-RA No alias (at1g02040 : 111.0) C2H2-type zinc finger family... 0.05 Orthogroups_2024-Update
PSME_00056858-RA No alias (at5g56200 : 86.7) C2H2 type zinc finger transcription... 0.02 Orthogroups_2024-Update
Potri.002G119300 No alias salt tolerance zinc finger 0.04 Orthogroups_2024-Update
Potri.004G216900 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
Potri.009G027700 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Sobic.001G330100.1 No alias C2H2-type subclass ZAT transcription factor 0.05 Orthogroups_2024-Update
Solyc06g060480 No alias Zinc finger family protein (AHRD V3.3 *** B9HPY6_POPTR) 0.02 Orthogroups_2024-Update
Solyc11g073060 No alias Zinc finger family protein (AHRD V3.3 *** B9HM54_POPTR) 0.04 Orthogroups_2024-Update
Sopen06g032200 No alias C2H2-type zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0004725 protein tyrosine phosphatase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!