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At3g60010


Description : SK13 [Source:UniProtKB/TrEMBL;Acc:A0A178VIM9]


Gene families : OG_42_0000356 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g60010
Cluster HCCA clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
At1g75950 No alias SKP1-like protein 1A [Source:UniProtKB/Swiss-Prot;Acc:Q39255] 0.05 Orthogroups_2024-Update
Bradi3g43760 No alias SKP1-like 4 0.04 Orthogroups_2024-Update
Brara.B02246.1 No alias ASK-type linker component of SCF E3 ubiquitin ligase complexes 0.04 Orthogroups_2024-Update
Glyma.02G045700 No alias S phase kinase-associated protein 1 0.03 Orthogroups_2024-Update
Glyma.16G123700 No alias S phase kinase-associated protein 1 0.03 Orthogroups_2024-Update
Mp3g00120.1 No alias target protein binding component SKP1/ASK1 of... 0.02 Orthogroups_2024-Update
PSME_00055392-RA No alias (at5g42190 : 191.0) Similar to SKP1 in yeast and humans... 0.02 Orthogroups_2024-Update
Sobic.010G218900.2 No alias ASK-type linker component of SCF E3 ubiquitin ligase complexes 0.03 Orthogroups_2024-Update
Solyc01g111640 No alias SKP1-like protein (AHRD V3.3 *** C3V9V9_CITMA) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR016073 Skp1_comp_POZ 3 62
IPR016072 Skp1_comp_dimer 105 152
No external refs found!