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  5. Sobic.006G035300.1

Sobic.006G035300.1


Description : membrane trafficking factor *(GFS9)


Gene families : OG_42_0003590 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003590_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G035300.1
Cluster HCAA Clusters: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
Bradi5g05162 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.02G198100 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.15G167100 No alias Function unknown 0.04 Orthogroups_2024-Update
Mp3g05320.1 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Seita.7G044700.1 No alias membrane trafficking factor *(GFS9) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR019155 CLEC16A/TT9_N 92 242
No external refs found!