Sobic.006G238600.1

Description : anion channel / anion

Gene families : OG_42_0000631 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000631_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.006G238600.1
Cluster	HCAA Clusters: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G071119	No alias	Voltage-gated chloride channel family protein	0.03	Orthogroups_2024-Update
GRMZM2G113409	No alias	chloride channel C	0.02	Orthogroups_2024-Update
Mp3g25240.1	No alias	anion channel / anion:proton antiporter (CLC)	0.02	Orthogroups_2024-Update
Potri.004G228300	No alias	chloride channel C	0.02	Orthogroups_2024-Update
Sopen07g003680	No alias	Voltage gated chloride channel	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005244	voltage-gated ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	IEA	16Dec
MF	GO:0005253	anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006821	chloride transport	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated anion channel activity	None	Extended
MF	GO:0008509	anion transmembrane transporter activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	16Dec

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Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEP	Predicted GO
CC	GO:0000781	chromosome, telomeric region	IEP	Predicted GO
MF	GO:0005488	binding	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
MF	GO:0008987	quinolinate synthetase A activity	IEP	Predicted GO
BP	GO:0009435	NAD biosynthetic process	IEP	Predicted GO
MF	GO:0015098	molybdate ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015689	molybdate ion transport	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
BP	GO:0016458	gene silencing	IEP	Predicted GO
MF	GO:0016881	acid-amino acid ligase activity	IEP	Predicted GO
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predicted GO
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predicted GO
BP	GO:0019674	NAD metabolic process	IEP	Predicted GO
BP	GO:0031047	gene silencing by RNA	IEP	Predicted GO
MF	GO:0031072	heat shock protein binding	IEP	Predicted GO
BP	GO:0032200	telomere organization	IEP	Predicted GO
BP	GO:0032774	RNA biosynthetic process	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0042592	homeostatic process	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Predicted GO
BP	GO:0060249	anatomical structure homeostasis	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
CC	GO:0098687	chromosomal region	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000644	CBS_dom	735	783
IPR001807	Cl-channel_volt-gated	173	587

External Links

No external refs found!

Sobic.006G238600.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation