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Description : Unknown function
Gene families : OG_42_0001279 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001279_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.006G274300.1 | |
| Cluster | HCAA Clusters: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_16956 | No alias | protein yls9 | 0.1 | Orthogroups_2024-Update | |
| A4A49_24264 | No alias | ndr1hin1-like protein 3 | 0.05 | Orthogroups_2024-Update | |
| A4A49_64938 | No alias | protein yls9 | 0.05 | Orthogroups_2024-Update | |
| At2g35980 | No alias | NDR1/HIN1-like protein 10... | 0.03 | Orthogroups_2024-Update | |
| Brara.A03396.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.B00382.1 | No alias | Unknown function | 0.07 | Orthogroups_2024-Update | |
| GRMZM2G074248 | No alias | Late embryogenesis abundant (LEA) hydroxyproline-rich... | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G106792 | No alias | NDR1/HIN1-like 2 | 0.09 | Orthogroups_2024-Update | |
| Glyma.02G197800 | No alias | NDR1/HIN1-like 2 | 0.03 | Orthogroups_2024-Update | |
| Glyma.03G201302 | No alias | Late embryogenesis abundant (LEA) hydroxyproline-rich... | 0.03 | Orthogroups_2024-Update | |
| Glyma.07G103800 | No alias | Late embryogenesis abundant (LEA) hydroxyproline-rich... | 0.03 | Orthogroups_2024-Update | |
| MA_10432342g0020 | No alias | (at5g06320 : 89.7) encodes a protein whose sequence is... | 0.05 | Orthogroups_2024-Update | |
| MA_71979g0010 | No alias | (at3g11650 : 114.0) Encodes a protein whose sequence is... | 0.04 | Orthogroups_2024-Update | |
| Potri.016G071600 | No alias | Late embryogenesis abundant (LEA) hydroxyproline-rich... | 0.03 | Orthogroups_2024-Update | |
| Seita.5G392200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G366200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc10g081970 | No alias | Late embryogenesis abundant (LEA) hydroxyproline-rich... | 0.05 | Orthogroups_2024-Update | |
| Solyc10g081980 | No alias | Late embryogenesis abundant (LEA) hydroxyproline-rich... | 0.05 | Orthogroups_2024-Update | |
| Sopen01g003220 | No alias | Late embryogenesis abundant protein | 0.02 | Orthogroups_2024-Update | |
| Sopen10g032490 | No alias | Late embryogenesis abundant protein | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003677 | DNA binding | IEP | Predicted GO |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
| MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
| MF | GO:0005543 | phospholipid binding | IEP | Predicted GO |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| MF | GO:0008289 | lipid binding | IEP | Predicted GO |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Predicted GO |
| BP | GO:0009725 | response to hormone | IEP | Predicted GO |
| BP | GO:0009733 | response to auxin | IEP | Predicted GO |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
| BP | GO:0010033 | response to organic substance | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0016567 | protein ubiquitination | IEP | Predicted GO |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Predicted GO |
| BP | GO:0042221 | response to chemical | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
| BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predicted GO |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predicted GO |
| BP | GO:0065007 | biological regulation | IEP | Predicted GO |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
| MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004864 | LEA_2 | 80 | 178 |
| No external refs found! |