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  5. Sobic.007G013100.2

Sobic.007G013100.2


Description : Unknown function


Gene families : OG_42_0000205 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G013100.2
Cluster HCAA Clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Bradi1g74250 No alias F-box/RNI-like superfamily protein 0.05 Orthogroups_2024-Update
Bradi4g45090 No alias F-box/RNI-like superfamily protein 0.06 Orthogroups_2024-Update
LOC_Os06g10140 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os06g10290 No alias OsFBX191 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g10300 No alias OsFBL29 - F-box domain and LRR containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.2G063200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G136600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G017800.1 No alias Unknown function 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006566 FBD 408 450
No external refs found!