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  5. Sobic.007G060900.1

Sobic.007G060900.1


Description : Unknown function


Gene families : OG_42_0000064 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G060900.1
Cluster HCAA Clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Bradi3g55006 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Bradi4g44556 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G040600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G119380.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g46550 No alias RGH1A, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g14380 No alias resistance protein LR10, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g16470 No alias MLA10, putative, expressed 0.07 Orthogroups_2024-Update
LOC_Os11g41170 No alias disease resistance protein RPM1, putative, expressed 0.03 Orthogroups_2024-Update
Seita.5G036400.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.8G133400.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006480 N-terminal protein amino acid methylation IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 181 410
No external refs found!