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  5. Sobic.007G080780.1

Sobic.007G080780.1


Description : Unknown function


Gene families : OG_42_0000172 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G080780.1
Cluster HCAA Clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Bradi1g44425 No alias disease resistance family protein / LRR family protein 0.04 Orthogroups_2024-Update
Bradi2g42820 No alias disease resistance family protein / LRR family protein 0.06 Orthogroups_2024-Update
Bradi3g05292 No alias disease resistance family protein / LRR family protein 0.05 Orthogroups_2024-Update
Bradi3g18400 No alias disease resistance family protein / LRR family protein 0.02 Orthogroups_2024-Update
Bradi3g41810 No alias disease resistance family protein / LRR family protein 0.06 Orthogroups_2024-Update
Bradi3g51110 No alias disease resistance family protein / LRR family protein 0.04 Orthogroups_2024-Update
Bradi4g16234 No alias receptor like protein 11 0.03 Orthogroups_2024-Update
Brara.E00937.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G079303 No alias receptor like protein 48 0.03 Orthogroups_2024-Update
Glyma.12G123366 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Glyma.16G174600 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Glyma.16G182866 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G001040.13 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G087410.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G002630.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G092150.5 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g41770 No alias leucine rich repeat protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g04810 No alias leucine rich repeat protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g22920 No alias Leucine rich repeat N-terminal domain containing... 0.02 Orthogroups_2024-Update
LOC_Os11g35450 No alias leucine-rich repeat receptor protein kinase EXS... 0.03 Orthogroups_2024-Update
LOC_Os11g35850 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os11g35980 No alias leucine rich repeat protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_19613g0010 No alias (at2g34930 : 394.0) disease resistance family protein /... 0.05 Orthogroups_2024-Update
PSME_00032344-RA No alias (at2g34930 : 350.0) disease resistance family protein /... 0.02 Orthogroups_2024-Update
Potri.012G034600 No alias disease resistance family protein / LRR family protein 0.02 Orthogroups_2024-Update
Potri.015G025100 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Potri.015G025200 No alias disease resistance family protein / LRR family protein 0.02 Orthogroups_2024-Update
Seita.1G122700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G215800.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.6G230900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G048200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G055500.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Seita.8G055600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G210601.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G012900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G130700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G235100.2 No alias Unknown function 0.06 Orthogroups_2024-Update
Solyc07g008590 No alias LOW QUALITY:Leucine-rich receptor-like kinase family... 0.03 Orthogroups_2024-Update
Solyc07g008600 No alias LOW QUALITY:Leucine-rich receptor-like kinase family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 39 76
IPR001611 Leu-rich_rpt 377 436
IPR001611 Leu-rich_rpt 858 880
IPR001611 Leu-rich_rpt 353 375
No external refs found!