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  5. Sobic.007G085300.1

Sobic.007G085300.1


Description : WRKY-type transcription factor


Gene families : OG_42_0000493 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000493_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G085300.1
Cluster HCAA Clusters: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
147026 No alias WRKY DNA-binding protein 17 0.05 Orthogroups_2024-Update
A4A49_28241 No alias putative wrky transcription factor 7 0.05 Orthogroups_2024-Update
Brara.D01389.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Brara.E01275.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.F02907.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G071907 No alias WRKY DNA-binding protein 11 0.03 Orthogroups_2024-Update
GRMZM2G090594 No alias WRKY DNA-binding protein 11 0.09 Orthogroups_2024-Update
GRMZM2G091331 No alias WRKY DNA-binding protein 11 0.07 Orthogroups_2024-Update
GRMZM2G148561 No alias WRKY DNA-binding protein 11 0.09 Orthogroups_2024-Update
GRMZM5G880069 No alias WRKY DNA-binding protein 74 0.06 Orthogroups_2024-Update
Glyma.01G189100 No alias WRKY DNA-binding protein 15 0.03 Orthogroups_2024-Update
Glyma.04G076200 No alias WRKY DNA-binding protein 11 0.03 Orthogroups_2024-Update
HORVU3Hr1G039500.1 No alias WRKY-type transcription factor 0.06 Orthogroups_2024-Update
HORVU5Hr1G052630.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os03g53050 No alias WRKY121, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g21950 No alias WRKY51, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g40570 No alias WRKY94, expressed 0.02 Orthogroups_2024-Update
MA_107950g0010 No alias (at4g24240 : 186.0) Encodes a Ca-dependent calmodulin... 0.04 Orthogroups_2024-Update
MA_31009g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_88419g0010 No alias (at2g30590 : 170.0) Encodes WRKY DNA-binding protein 21... 0.03 Orthogroups_2024-Update
PSME_00043733-RA No alias (at2g30590 : 156.0) Encodes WRKY DNA-binding protein 21... 0.04 Orthogroups_2024-Update
Potri.007G047400 No alias WRKY DNA-binding protein 7 0.04 Orthogroups_2024-Update
Potri.018G008500 No alias WRKY DNA-binding protein 11 0.05 Orthogroups_2024-Update
Potri.018G139300 No alias WRKY DNA-binding protein 11 0.06 Orthogroups_2024-Update
Seita.1G154200.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.3G376700.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Sopen04g032150 No alias WRKY DNA -binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR018872 Zn-cluster-dom 192 230
IPR003657 WRKY_dom 250 306
No external refs found!