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  5. Sobic.008G025300.1

Sobic.008G025300.1


Description : Unknown function


Gene families : OG_42_0000492 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000492_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G025300.1
Cluster HCAA Clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Bradi2g20302 No alias Protein of unknown function (DUF567) 0.03 Orthogroups_2024-Update
MA_111351g0010 No alias (at2g38640 : 136.0) Protein of unknown function... 0.02 Orthogroups_2024-Update
MA_423312g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00030508-RA No alias (at3g14260 : 112.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
PSME_00041701-RA No alias (at2g38640 : 130.0) Protein of unknown function... 0.04 Orthogroups_2024-Update
Potri.006G067000 No alias Protein of unknown function (DUF567) 0.04 Orthogroups_2024-Update
Sobic.005G016500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen03g035620 No alias Tubby C 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
InterPro domains Description Start Stop
IPR007612 LOR 33 217
No external refs found!