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  5. Sobic.008G147101.1

Sobic.008G147101.1


Description : GARP subgroup HHO transcription factor


Gene families : OG_42_0002261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G147101.1
Cluster HCAA Clusters: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
At1g49560 No alias Transcription factor HHO6... 0.03 Orthogroups_2024-Update
Potri.004G144800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.3G370000.1 No alias GARP subgroup HHO transcription factor 0.03 Orthogroups_2024-Update
Seita.9G080000.1 No alias GARP subgroup HHO transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G016300.1 No alias GARP subgroup HHO transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 248 299
No external refs found!