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At4g02980


Description : Auxin-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P33487]


Gene families : OG_42_0007580 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007580_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g02980
Cluster HCCA clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Seita.3G348700.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0010011 auxin binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000526 Auxin-bd 34 198
No external refs found!