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  5. Sobic.009G072900.2

Sobic.009G072900.2


Description : Unknown function


Gene families : OG_42_0000322 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000322_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G072900.2
Cluster HCAA Clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
A4A49_30578 No alias iq domain-containing protein iqm4 0.05 Orthogroups_2024-Update
At2g26190 No alias IQ domain-containing protein IQM4... 0.02 Orthogroups_2024-Update
Bradi1g73900 No alias calmodulin-binding family protein 0.02 Orthogroups_2024-Update
Brara.A03251.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.B01240.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H01282.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J01123.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Cre16.g686600 No alias calmodulin-binding family protein 0.02 Orthogroups_2024-Update
GRMZM2G054900 No alias calmodulin-binding family protein 0.04 Orthogroups_2024-Update
GRMZM2G061723 No alias calmodulin-binding family protein 0.03 Orthogroups_2024-Update
GRMZM2G424020 No alias calmodulin-binding family protein 0.03 Orthogroups_2024-Update
Glyma.13G105800 No alias calmodulin-binding family protein 0.04 Orthogroups_2024-Update
Glyma.15G171000 No alias calmodulin-binding family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G074410.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G041930.10 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g07110 No alias calmodulin-binding protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_50509g0010 No alias (at3g13600 : 466.0) calmodulin-binding family protein;... 0.03 Orthogroups_2024-Update
MA_52703g0010 No alias (at3g52870 : 208.0) IQ calmodulin-binding motif family... 0.07 Orthogroups_2024-Update
MA_63468g0010 No alias (at3g13600 : 380.0) calmodulin-binding family protein;... 0.05 Orthogroups_2024-Update
PSME_00037103-RA No alias (at3g13600 : 414.0) calmodulin-binding family protein;... 0.06 Orthogroups_2024-Update
Potri.006G226400 No alias calmodulin-binding family protein 0.04 Orthogroups_2024-Update
Potri.008G023866 No alias IQ calmodulin-binding motif family protein 0.03 Orthogroups_2024-Update
Potri.015G125700 No alias calmodulin-binding family protein 0.04 Orthogroups_2024-Update
Seita.3G121200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.5G206500.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Seita.7G323400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G389500.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.J024600.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.009G257100.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Solyc07g040710 No alias Calmodulin binding protein, putative (AHRD V3.3 *** B9RK85_RICCO) 0.03 Orthogroups_2024-Update
Sopen00g007360 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen10g029260 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen10g031180 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!