1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.010G062500.1

Sobic.010G062500.1


Description : phosphatase-type DBP-type transcription factor & clade G phosphatase *(DBP)


Gene families : OG_42_0000568 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000568_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G062500.1
Cluster HCAA Clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
A4A49_05470 No alias putative protein phosphatase 2c 2 0.03 Orthogroups_2024-Update
At3g62260 No alias Probable protein phosphatase 2C 49... 0.03 Orthogroups_2024-Update
Bradi1g36920 No alias DNA-binding protein phosphatase 1 0.04 Orthogroups_2024-Update
Bradi3g54290 No alias DNA-binding protein phosphatase 1 0.05 Orthogroups_2024-Update
Glyma.09G031700 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Glyma.13G165300 No alias DNA-binding protein phosphatase 1 0.04 Orthogroups_2024-Update
Glyma.17G105800 No alias DNA-binding protein phosphatase 1 0.06 Orthogroups_2024-Update
HORVU6Hr1G086560.2 No alias phosphatase-type DBP-type transcription factor & clade G... 0.06 Orthogroups_2024-Update
HORVU7Hr1G029330.1 No alias phosphatase-type DBP-type transcription factor & clade G... 0.05 Orthogroups_2024-Update
PSME_00004441-RA No alias (at2g33700 : 325.0) Protein phosphatase 2C family... 0.03 Orthogroups_2024-Update
Seita.1G353300.1 No alias phosphatase-type DBP-type transcription factor & clade G... 0.03 Orthogroups_2024-Update
Seita.4G052700.1 No alias phosphatase-type DBP-type transcription factor & clade G... 0.04 Orthogroups_2024-Update
Solyc01g068000 No alias Protein phosphatase 2C-like protein (AHRD V3.3 *** G7IBT5_MEDTR) 0.02 Orthogroups_2024-Update
Sopen04g036230 No alias Protein phosphatase 2C 0.02 Orthogroups_2024-Update
evm.model.contig_3620.3 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 63 311
No external refs found!