- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : component *(mL46) of large mitoribosomal-subunit proteome
Gene families : OG_42_0004331 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004331_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.010G125100.1 | |
| Cluster | HCAA Clusters: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GRMZM2G133050 | No alias | decoy | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G007400 | No alias | decoy | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G045140.1 | No alias | component *(mL46) of large mitoribosomal-subunit proteome | 0.03 | Orthogroups_2024-Update | |
| Potri.002G164800 | No alias | decoy | 0.03 | Orthogroups_2024-Update | |
| Pp1s5_445V6 | No alias | 50s ribosomal subunit l30 | 0.04 | Orthogroups_2024-Update | |
| Seita.4G131300.1 | No alias | component *(mL46) of large mitoribosomal-subunit proteome | 0.03 | Orthogroups_2024-Update | |
| evm.model.contig_2044.29 | No alias | (at1g14620 : 109.0) DECOY (DECOY); FUNCTIONS IN:... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000725 | recombinational repair | IEP | Predicted GO |
| BP | GO:0000726 | non-recombinational repair | IEP | Predicted GO |
| MF | GO:0003678 | DNA helicase activity | IEP | Predicted GO |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
| MF | GO:0004017 | adenylate kinase activity | IEP | Predicted GO |
| MF | GO:0004018 | N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity | IEP | Predicted GO |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Predicted GO |
| MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
| CC | GO:0005787 | signal peptidase complex | IEP | Predicted GO |
| CC | GO:0005840 | ribosome | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006188 | IMP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
| BP | GO:0006281 | DNA repair | IEP | Predicted GO |
| BP | GO:0006302 | double-strand break repair | IEP | Predicted GO |
| BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Predicted GO |
| BP | GO:0006310 | DNA recombination | IEP | Predicted GO |
| BP | GO:0006400 | tRNA modification | IEP | Predicted GO |
| BP | GO:0006412 | translation | IEP | Predicted GO |
| BP | GO:0006465 | signal peptide processing | IEP | Predicted GO |
| BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
| BP | GO:0006950 | response to stress | IEP | Predicted GO |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
| MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
| BP | GO:0016485 | protein processing | IEP | Predicted GO |
| MF | GO:0016597 | amino acid binding | IEP | Predicted GO |
| MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Predicted GO |
| MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Predicted GO |
| MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Predicted GO |
| MF | GO:0016829 | lyase activity | IEP | Predicted GO |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Predicted GO |
| MF | GO:0016842 | amidine-lyase activity | IEP | Predicted GO |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
| CC | GO:0030014 | CCR4-NOT complex | IEP | Predicted GO |
| MF | GO:0031406 | carboxylic acid binding | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
| MF | GO:0043177 | organic acid binding | IEP | Predicted GO |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| BP | GO:0046040 | IMP metabolic process | IEP | Predicted GO |
| MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Predicted GO |
| BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
| CC | GO:1905368 | peptidase complex | IEP | Predicted GO |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |