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  5. Sobic.010G163000.1

Sobic.010G163000.1


Description : EC_1.1 oxidoreductase acting on CH-OH group of donor


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G163000.1
Cluster HCAA Clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
A4A49_21867 No alias flavin-dependent oxidoreductase fox1 0.03 Orthogroups_2024-Update
At1g26420 No alias Berberine bridge enzyme-like 7... 0.06 Orthogroups_2024-Update
At1g30740 No alias FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30740] 0.05 Orthogroups_2024-Update
Bradi1g38250 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Brara.A01152.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.E00947.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.06 Orthogroups_2024-Update
Brara.G00508.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Brara.H01046.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Glyma.05G125000 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Glyma.08G080200 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Glyma.08G112600 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G086520.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Kfl00983_0010 kfl00983_0010_v1.1 (at5g44380 : 90.9) FAD-binding Berberine family protein;... 0.02 Orthogroups_2024-Update
LOC_Os06g35590 No alias reticuline oxidase-like protein precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g21690 No alias EDA28/MEE23, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g30310 No alias reticuline oxidase-like protein precursor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00034781-RA No alias (at5g44390 : 411.0) FAD-binding Berberine family... 0.04 Orthogroups_2024-Update
Potri.001G440700 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.001G459100 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Potri.011G160900 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Potri.019G063400 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Seita.4G178100.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Seita.6G055100.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Solyc02g070070 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT2G34790.1) 0.03 Orthogroups_2024-Update
Sopen02g019230 No alias FAD binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA 16Dec
MF GO:0050660 flavin adenine dinucleotide binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR012951 BBE 464 523
IPR006094 Oxid_FAD_bind_N 79 217
No external refs found!