1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.010G255600.1

Sobic.010G255600.1


Description : photosynthetic acclimation MPH2 acclimation factor


Gene families : OG_42_0004829 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004829_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G255600.1
Cluster HCAA Clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G142800 No alias chloroplast thylakoid lumen protein 0.02 Orthogroups_2024-Update
Glyma.06G224200 No alias chloroplast thylakoid lumen protein 0.02 Orthogroups_2024-Update
Kfl00116_0230 kfl00116_0230_v1.1 (at4g02530 : 81.3) chloroplast thylakoid lumen protein;... 0.03 Orthogroups_2024-Update
LOC_Os06g49160 No alias thylakoid lumenal 16.5 kDa protein, chloroplast... 0.02 Orthogroups_2024-Update
Mp7g01570.1 No alias photosynthetic acclimation MPH2 acclimation factor 0.02 Orthogroups_2024-Update
Potri.006G067600 No alias chloroplast thylakoid lumen protein 0.02 Orthogroups_2024-Update
Pp1s73_31V6 No alias thylakoid lumenalkdachloroplast precursor 0.02 Orthogroups_2024-Update
Seita.4G271700.1 No alias photosynthetic acclimation MPH2 acclimation factor 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!