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  5. Seita.1G056700.1

Seita.1G056700.1


Description : component *(bS21c) of small plastid ribosomal-subunit proteome


Gene families : OG_42_0003775 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003775_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G056700.1
Cluster HCAA Clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
444102 No alias Ribosomal protein S21 family protein 0.04 Orthogroups_2024-Update
A4A49_30880 No alias hypothetical protein 0.08 Orthogroups_2024-Update
Brara.B03274.1 No alias component *(bS21c) of small plastid ribosomal-subunit proteome 0.1 Orthogroups_2024-Update
Brara.I00278.1 No alias component *(bS21c) of small plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Cre01.g017300 No alias Function unknown 0.1 Orthogroups_2024-Update
Glyma.17G181000 No alias Ribosomal protein S21 family protein 0.02 Orthogroups_2024-Update
Glyma.19G071300 No alias Ribosomal protein S21 family protein 0.07 Orthogroups_2024-Update
Glyma.19G090000 No alias Ribosomal protein S21 family protein 0.06 Orthogroups_2024-Update
HORVU6Hr1G035260.2 No alias component *(bS21c) of small plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
MA_249305g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Mp4g21580.1 No alias component mtRPS21|psRPS21 of mitochondrial ribosome... 0.02 Orthogroups_2024-Update
Potri.001G331600 No alias Ribosomal protein S21 family protein 0.04 Orthogroups_2024-Update
Pp1s241_34V6 No alias 30s ribosomal protein s21 0.03 Orthogroups_2024-Update
Sobic.004G072000.1 No alias component *(bS21c) of small plastid ribosomal-subunit proteome 0.13 Orthogroups_2024-Update
Solyc02g068090 No alias 30S ribosomal protein S21 (AHRD V3.3 *** W9SIU2_9ROSA) 0.03 Orthogroups_2024-Update
Sopen02g017200 No alias Ribosomal protein S21 0.05 Orthogroups_2024-Update
evm.model.tig00000863.30 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001911 Ribosomal_S21 50 104
No external refs found!