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  5. Seita.1G174600.1

Seita.1G174600.1


Description : Unknown function


Gene families : OG_42_0000470 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000470_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G174600.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
At3g26690 No alias NUDX13 [Source:UniProtKB/TrEMBL;Acc:A0A178VBM7] 0.03 Orthogroups_2024-Update
Brara.B02097.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F01288.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.02G244100 No alias nudix hydrolase homolog 17 0.05 Orthogroups_2024-Update
Glyma.14G213400 No alias nudix hydrolase homolog 17 0.06 Orthogroups_2024-Update
LOC_Os02g32060 No alias hydrolase, NUDIX family, domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.015G035000 No alias nudix hydrolase homolog 4 0.03 Orthogroups_2024-Update
Sobic.001G042800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G077100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G105300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen04g006630 No alias NUDIX domain 0.02 Orthogroups_2024-Update
evm.model.contig_3427.11 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000086 NUDIX_hydrolase_dom 65 177
No external refs found!