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  5. Seita.1G181800.1

Seita.1G181800.1


Description : component *(uS11) of small ribosomal-subunit (SSU) proteome


Gene families : OG_42_0001574 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001574_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G181800.1
Cluster HCAA Clusters: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
183051 No alias Ribosomal protein S11 family protein 0.06 Orthogroups_2024-Update
At3g52580 No alias 40S ribosomal protein S14-3... 0.04 Orthogroups_2024-Update
Bradi1g32830 No alias Ribosomal protein S11 family protein 0.11 Orthogroups_2024-Update
Bradi3g04790 No alias Ribosomal protein S11 family protein 0.11 Orthogroups_2024-Update
Brara.A03404.1 No alias component *(uS11) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Brara.C01814.1 No alias component *(uS11) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Brara.C03369.1 No alias component *(uS11) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Brara.D02197.1 No alias component *(uS11) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Brara.E00860.1 No alias component *(uS11) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Brara.E02925.1 No alias component *(uS11) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Brara.I03565.1 No alias component *(uS11) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Brara.J02603.1 No alias component *(uS11) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Cre11.g480150 No alias Ribosomal protein S11 family protein 0.07 Orthogroups_2024-Update
GRMZM2G069762 No alias Ribosomal protein S11 family protein 0.05 Orthogroups_2024-Update
GRMZM2G120432 No alias Ribosomal protein S11 family protein 0.02 Orthogroups_2024-Update
Glyma.03G241100 No alias Ribosomal protein S11 family protein 0.03 Orthogroups_2024-Update
Glyma.03G241300 No alias Ribosomal protein S11 family protein 0.04 Orthogroups_2024-Update
Glyma.13G217200 No alias Ribosomal protein S11 family protein 0.03 Orthogroups_2024-Update
Glyma.15G095300 No alias Ribosomal protein S11 family protein 0.06 Orthogroups_2024-Update
Glyma.19G238600 No alias Ribosomal protein S11 family protein 0.03 Orthogroups_2024-Update
Glyma.19G238800 No alias Ribosomal protein S11 family protein 0.08 Orthogroups_2024-Update
HORVU0Hr1G004130.1 No alias component *(uS11) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Kfl00094_0120 kfl00094_0120_v1.1 (p19951|rs142_maize : 200.0) 40S ribosomal protein S14... 0.02 Orthogroups_2024-Update
LOC_Os02g06700 No alias ribosomal protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_113075g0010 No alias (p19951|rs142_maize : 223.0) 40S ribosomal protein S14... 0.06 Orthogroups_2024-Update
Mp8g03250.1 No alias component RPS14 of SSU proteome 0.05 Orthogroups_2024-Update
Mp8g10900.1 No alias component RPS14 of SSU proteome 0.05 Orthogroups_2024-Update
PSME_00002720-RA No alias (p19951|rs142_maize : 226.0) 40S ribosomal protein S14... 0.07 Orthogroups_2024-Update
Potri.001G218700 No alias Ribosomal protein S11 family protein 0.1 Orthogroups_2024-Update
Pp1s271_98V6 No alias 40s ribosomal protein 0.12 Orthogroups_2024-Update
Pp1s316_6V6 No alias 40s ribosomal protein 0.09 Orthogroups_2024-Update
Sobic.006G106100.1 No alias component *(uS11) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Sobic.010G205400.1 No alias component *(uS11) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Sobic.010G206200.1 No alias component *(uS11) of small ribosomal-subunit (SSU) proteome 0.2 Orthogroups_2024-Update
Solyc02g070570 No alias 30S ribosomal protein S11 (AHRD V3.3 *** A0A0K9PCU6_ZOSMR) 0.05 Orthogroups_2024-Update
Solyc09g010100 No alias 30S ribosomal protein S11 (AHRD V3.3 *** A0A0K9PVQ7_ZOSMR) 0.15 Orthogroups_2024-Update
Solyc10g083280 No alias 40S ribosomal protein S14-2 0.06 Orthogroups_2024-Update
Sopen02g019660 No alias Ribosomal protein S11 0.06 Orthogroups_2024-Update
Sopen09g004840 No alias Ribosomal protein S11 0.08 Orthogroups_2024-Update
Sopen10g032760 No alias Ribosomal protein S11 0.13 Orthogroups_2024-Update
evm.model.contig_3384.21 No alias (p46295|rs14_chlre : 213.0) 40S ribosomal protein S14 -... 0.11 Orthogroups_2024-Update
evm.model.tig00001154.44 No alias (p19950|rs141_maize : 166.0) 40S ribosomal protein S14... 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001971 Ribosomal_S11 29 147
No external refs found!