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  5. At4g12730

At4g12730


Description : Fasciclin-like arabinogalactan protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU13]


Gene families : OG_42_0000318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g12730
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
441324 No alias FASCICLIN-like arabinogalactan protein 8 0.03 Orthogroups_2024-Update
A4A49_01102 No alias fasciclin-like arabinogalactan protein 1 0.03 Orthogroups_2024-Update
A4A49_05662 No alias fasciclin-like arabinogalactan protein 3 0.03 Orthogroups_2024-Update
A4A49_11805 No alias fasciclin-like arabinogalactan protein 1 0.02 Orthogroups_2024-Update
Bradi4g34420 No alias FASCICLIN-like arabinogalactan 2 0.03 Orthogroups_2024-Update
Brara.F02082.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Brara.I04200.1 No alias regulatory protein *(DEAP1) of exine formation &... 0.06 Orthogroups_2024-Update
GRMZM2G003752 No alias FASCICLIN-like arabinogalactan-protein 10 0.02 Orthogroups_2024-Update
GRMZM2G144610 No alias FASCICLIN-like arabinogalactan 2 0.02 Orthogroups_2024-Update
Glyma.02G308700 No alias FASCICLIN-like arabinogalactan 2 0.04 Orthogroups_2024-Update
Glyma.18G222200 No alias FASCICLIN-like arabinogalactan protein 8 0.05 Orthogroups_2024-Update
Mp5g05390.1 No alias fasciclin-type arabinogalactan protein 0.05 Orthogroups_2024-Update
Mp5g05430.1 No alias fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
Mp5g05440.1 No alias fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
Mp8g03130.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.02 Orthogroups_2024-Update
PSME_00021473-RA No alias (at2g45470 : 140.0) FASCICLIN-like arabinogalactan... 0.03 Orthogroups_2024-Update
PSME_00055915-RA No alias (at2g45470 : 293.0) FASCICLIN-like arabinogalactan... 0.03 Orthogroups_2024-Update
Potri.001G037800 No alias FASCICLIN-like arabinogalactan protein 14 precursor 0.03 Orthogroups_2024-Update
Potri.014G071700 No alias FASCICLIN-like arabinogalactan-protein 10 0.04 Orthogroups_2024-Update
Seita.2G154700.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Seita.3G217100.1 No alias regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.04 Orthogroups_2024-Update
Seita.6G110400.1 No alias Fasciclin-type arabinogalactan protein 0.05 Orthogroups_2024-Update
Sobic.009G055900.1 No alias Fasciclin-type arabinogalactan protein 0.05 Orthogroups_2024-Update
Solyc01g091530 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc03g112880 No alias Fasciclin-like arabinogalactan family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc10g005960 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc12g006110 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen07g023980 No alias Fasciclin domain 0.03 Orthogroups_2024-Update
Sopen08g002270 No alias Fasciclin domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 37 132
IPR000782 FAS1_domain 200 328
No external refs found!