- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : plastidial thioredoxin *(TrxL2)
Gene families : OG_42_0003019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003019_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica: Seita.1G336800.1 | |
| Cluster | HCAA Clusters: Cluster_115 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GRMZM2G023711 | No alias | WCRKC thioredoxin 1 | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G078960.8 | No alias | plastidial thioredoxin *(TrxL2) | 0.04 | Orthogroups_2024-Update | |
| LOC_Os02g53400 | No alias | thioredoxin, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| Sobic.004G315100.1 | No alias | plastidial thioredoxin *(TrxL2) | 0.09 | Orthogroups_2024-Update | |
| Sopen10g029540 | No alias | Thioredoxin | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
| MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
| MF | GO:0004017 | adenylate kinase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005525 | GTP binding | IEP | Predicted GO |
| CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
| BP | GO:0006066 | alcohol metabolic process | IEP | Predicted GO |
| BP | GO:0006188 | IMP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006189 | 'de novo' IMP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
| BP | GO:0006457 | protein folding | IEP | Predicted GO |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
| MF | GO:0016597 | amino acid binding | IEP | Predicted GO |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
| MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Predicted GO |
| MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Predicted GO |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Predicted GO |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
| BP | GO:0019751 | polyol metabolic process | IEP | Predicted GO |
| MF | GO:0031406 | carboxylic acid binding | IEP | Predicted GO |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
| MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
| MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043168 | anion binding | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| MF | GO:0043177 | organic acid binding | IEP | Predicted GO |
| CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
| BP | GO:0043647 | inositol phosphate metabolic process | IEP | Predicted GO |
| BP | GO:0046040 | IMP metabolic process | IEP | Predicted GO |
| BP | GO:0046164 | alcohol catabolic process | IEP | Predicted GO |
| BP | GO:0046174 | polyol catabolic process | IEP | Predicted GO |
| BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | Predicted GO |
| BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Predicted GO |
| BP | GO:0051276 | chromosome organization | IEP | Predicted GO |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Predicted GO |
| MF | GO:0051540 | metal cluster binding | IEP | Predicted GO |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
| BP | GO:0071545 | inositol phosphate catabolic process | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013766 | Thioredoxin_domain | 92 | 171 |
| No external refs found! |