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  5. Seita.2G016100.1

Seita.2G016100.1


Description : Unknown function


Gene families : OG_42_0000127 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G016100.1
Cluster HCAA Clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Bradi1g55357 No alias F-box and associated interaction domains-containing protein 0.04 Orthogroups_2024-Update
Bradi1g73744 No alias Function unknown 0.04 Orthogroups_2024-Update
Bradi2g01157 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g10105 No alias Function unknown 0.04 Orthogroups_2024-Update
HORVU5Hr1G121970.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os10g04780 No alias OsFBX363 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g05010 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os11g06580 No alias OsFBX397 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Sobic.001G198500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G090600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 11 44
No external refs found!