Description : component *(NOT10) of mRNA deadenylation CCR4-NOT complex
Gene families : OG_42_0005560 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005560_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.2G146300.1 | |
Cluster | HCAA Clusters: Cluster_216 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi3g20510 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
Glyma.17G111200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
Kfl00028_0020 | kfl00028_0020_v1.1 | (at5g35430 : 145.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000151 | ubiquitin ligase complex | IEP | Predicted GO |
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Predicted GO |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predicted GO |
BP | GO:0000726 | non-recombinational repair | IEP | Predicted GO |
MF | GO:0003729 | mRNA binding | IEP | Predicted GO |
MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0004386 | helicase activity | IEP | Predicted GO |
MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
MF | GO:0005516 | calmodulin binding | IEP | Predicted GO |
CC | GO:0005685 | U1 snRNP | IEP | Predicted GO |
BP | GO:0006302 | double-strand break repair | IEP | Predicted GO |
BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Predicted GO |
BP | GO:0006376 | mRNA splice site selection | IEP | Predicted GO |
BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
BP | GO:0006508 | proteolysis | IEP | Predicted GO |
BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER | IEP | Predicted GO |
BP | GO:0007165 | signal transduction | IEP | Predicted GO |
BP | GO:0008150 | biological_process | IEP | Predicted GO |
MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predicted GO |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Predicted GO |
BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
BP | GO:0010921 | regulation of phosphatase activity | IEP | Predicted GO |
BP | GO:0016579 | protein deubiquitination | IEP | Predicted GO |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
BP | GO:0018208 | peptidyl-proline modification | IEP | Predicted GO |
MF | GO:0019208 | phosphatase regulator activity | IEP | Predicted GO |
BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Predicted GO |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Predicted GO |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | Predicted GO |
MF | GO:0019902 | phosphatase binding | IEP | Predicted GO |
MF | GO:0019903 | protein phosphatase binding | IEP | Predicted GO |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predicted GO |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predicted GO |
BP | GO:0031399 | regulation of protein modification process | IEP | Predicted GO |
MF | GO:0032182 | ubiquitin-like protein binding | IEP | Predicted GO |
MF | GO:0034450 | ubiquitin-ubiquitin ligase activity | IEP | Predicted GO |
BP | GO:0035303 | regulation of dephosphorylation | IEP | Predicted GO |
BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Predicted GO |
BP | GO:0036211 | protein modification process | IEP | Predicted GO |
MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Predicted GO |
MF | GO:0043130 | ubiquitin binding | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Predicted GO |
BP | GO:0050790 | regulation of catalytic activity | IEP | Predicted GO |
BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Predicted GO |
BP | GO:0051336 | regulation of hydrolase activity | IEP | Predicted GO |
MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predicted GO |
MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predicted GO |
BP | GO:0065009 | regulation of molecular function | IEP | Predicted GO |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
MF | GO:0070403 | NAD+ binding | IEP | Predicted GO |
BP | GO:0070646 | protein modification by small protein removal | IEP | Predicted GO |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predicted GO |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predicted GO |
MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Predicted GO |
CC | GO:0120114 | Sm-like protein family complex | IEP | Predicted GO |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
CC | GO:1902494 | catalytic complex | IEP | Predicted GO |
CC | GO:1903293 | phosphatase complex | IEP | Predicted GO |
No InterPro domains available for this sequence
No external refs found! |