1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.2G188800.1

Seita.2G188800.1


Description : Unknown function


Gene families : OG_42_0000723 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000723_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G188800.1
Cluster HCAA Clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G126413 No alias VQ motif-containing protein 0.03 Orthogroups_2024-Update
GRMZM2G420715 No alias VQ motif-containing protein 0.05 Orthogroups_2024-Update
Glyma.09G051900 No alias VQ motif-containing protein 0.04 Orthogroups_2024-Update
Glyma.14G002800 No alias VQ motif-containing protein 0.03 Orthogroups_2024-Update
Glyma.14G172200 No alias VQ motif-containing protein 0.02 Orthogroups_2024-Update
LOC_Os06g45570 No alias VQ domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.016G017900 No alias VQ motif-containing protein 0.02 Orthogroups_2024-Update
Sobic.002G185200.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G221032.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc12g057000 No alias VQ motif-containing protein (AHRD V3.3 *-* A0A061FH18_THECC) 0.02 Orthogroups_2024-Update
Sopen04g024900 No alias VQ motif 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008889 VQ 151 178
No external refs found!