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Description : RING/U-box superfamily protein [Source:TAIR;Acc:AT4G15975]
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Arabidopsis release: At4g15975 | |
| Cluster | HCCA clusters: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_27114 | No alias | ring-h2 finger protein atl54 | 0.03 | Orthogroups_2024-Update | |
| At2g37580 | No alias | RING-H2 finger protein ATL33... | 0.04 | Orthogroups_2024-Update | |
| Bradi5g09830 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.B02021.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.E02317.1 | No alias | regulatory ubiquitin-protein ligase *(PRU2) &... | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G301585 | No alias | TOXICOS EN LEVADURA 2 | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G447566 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.06G099800 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G191800 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU0Hr1G016510.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G069960.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G029910.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G080020.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| MA_85088g0010 | No alias | (at1g49230 : 131.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| Potri.001G032300 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.008G019000 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Potri.019G043900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s257_3V6 | No alias | ac009177_16 ring-h2 zinc finger protein atl6 | 0.02 | Orthogroups_2024-Update | |
| Seita.1G270700.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Seita.2G087800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.7G205000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G018400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G181200.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G279000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G056600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G157500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Solyc11g066510 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1) | 0.04 | Orthogroups_2024-Update | |
| Sopen01g035300 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| Sopen11g002340 | No alias | Ring finger domain | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004506 | squalene monooxygenase activity | IEP | Predicted GO |
| BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Predicted GO |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity | IEP | Predicted GO |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Predicted GO |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 75 | 118 |
| No external refs found! |