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  5. Seita.2G284200.1

Seita.2G284200.1


Description : BBX class-IV transcription factor


Gene families : OG_42_0004045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G284200.1
Cluster HCAA Clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
111647 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
A4A49_04905 No alias b-box zinc finger protein 19 0.05 Orthogroups_2024-Update
At2g21320 No alias B-box zinc finger protein 18... 0.04 Orthogroups_2024-Update
At4g38960 No alias B-box type zinc finger family protein... 0.07 Orthogroups_2024-Update
Bradi4g35950 No alias B-box type zinc finger family protein 0.06 Orthogroups_2024-Update
Brara.F03890.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Brara.H01834.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
Brara.I04651.1 No alias BBX class-IV transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G143718 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.01G168500 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.12G037200 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G081190.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
LOC_Os09g35880 No alias B-box zinc finger family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10433513g0010 No alias (at4g38960 : 134.0) B-box type zinc finger family... 0.04 Orthogroups_2024-Update
Potri.004G162600 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Potri.005G117100 No alias B-box zinc finger family protein 0.04 Orthogroups_2024-Update
Potri.009G124400 No alias B-box type zinc finger family protein 0.02 Orthogroups_2024-Update
Pp1s207_121V6 No alias F3K23.8; zinc finger (B-box type) family protein... 0.03 Orthogroups_2024-Update
Sobic.002G273300.1 No alias BBX class-IV transcription factor 0.08 Orthogroups_2024-Update
Solyc01g110370 No alias Zinc finger, B-box (AHRD V3.3 *** A0A118K2C5_CYNCS) 0.07 Orthogroups_2024-Update
Solyc02g084420 No alias B-box zinc finger family protein (AHRD V3.3 *** AT2G21320.1) 0.06 Orthogroups_2024-Update
Sopen01g052520 No alias B-box zinc finger 0.06 Orthogroups_2024-Update
Sopen02g029130 No alias B-box zinc finger 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004359 glutaminase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042816 vitamin B6 metabolic process IEP Predicted GO
BP GO:0042819 vitamin B6 biosynthetic process IEP Predicted GO
BP GO:0042822 pyridoxal phosphate metabolic process IEP Predicted GO
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:0046184 aldehyde biosynthetic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!