1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.2G305000.1

Seita.2G305000.1


Description : Unknown function


Gene families : OG_42_0000405 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000405_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G305000.1
Cluster HCAA Clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
A4A49_13103 No alias transmembrane 9 superfamily member 11 0.03 Orthogroups_2024-Update
Bradi3g56600 No alias Endomembrane protein 70 protein family 0.04 Orthogroups_2024-Update
Bradi4g37690 No alias Endomembrane protein 70 protein family 0.03 Orthogroups_2024-Update
Cre12.g494350 No alias Endomembrane protein 70 protein family 0.01 Orthogroups_2024-Update
GRMZM2G018126 No alias Endomembrane protein 70 protein family 0.03 Orthogroups_2024-Update
HORVU5Hr1G088680.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00519_0100 kfl00519_0100_v1.1 (at3g13772 : 894.0) Encodes an Arabidopsis Transmembrane... 0.05 Orthogroups_2024-Update
PSME_00006153-RA No alias (at3g13772 : 934.0) Encodes an Arabidopsis Transmembrane... 0.02 Orthogroups_2024-Update
Pp1s60_227V6 No alias endosomal p24a protein 0.03 Orthogroups_2024-Update
Pp1s83_105V6 No alias endosomal p24a protein 0.03 Orthogroups_2024-Update
Sopen06g022070 No alias Endomembrane protein 70 0.03 Orthogroups_2024-Update
evm.model.contig_3542.6 No alias (at5g25100 : 478.0) Endomembrane protein 70 protein... 0.02 Orthogroups_2024-Update
evm.model.contig_3774.1 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.contig_479.10 No alias (at3g13772 : 439.0) Encodes an Arabidopsis Transmembrane... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004240 EMP70 57 595
No external refs found!