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  5. Seita.2G358500.1

Seita.2G358500.1


Description : assembly factor involved in RuBisCo assembly *(RbcX)


Gene families : OG_42_0003251 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G358500.1
Cluster HCAA Clusters: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g38230 No alias expressed protein 0.04 Orthogroups_2024-Update
Pp1s24_26V6 No alias unknown [Picea sitchensis] 0.02 Orthogroups_2024-Update
Sobic.001G046000.1 No alias assembly factor involved in RuBisCo assembly *(RbcX) 0.02 Orthogroups_2024-Update
Sobic.002G345200.1 No alias assembly factor involved in RuBisCo assembly *(RbcX) 0.02 Orthogroups_2024-Update
Sopen11g025500 No alias RbcX protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0044183 protein binding involved in protein folding IEA 16Dec
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003435 Chaperonin_RcbX 95 195
No external refs found!