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  5. Seita.2G373600.1

Seita.2G373600.1


Description : C2H2-type subclass ZAT transcription factor


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G373600.1
Cluster HCAA Clusters: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
A4A49_01661 No alias zinc finger protein zat10 0.02 Orthogroups_2024-Update
Bradi1g14750 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Bradi4g09410 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
Brara.A02157.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Brara.B03976.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Brara.C02280.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Brara.E00765.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Brara.E02244.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Brara.F01949.1 No alias C2H2-type subclass ZAT transcription factor 0.06 Orthogroups_2024-Update
Brara.I03003.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Brara.J01055.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Glyma.10G059700 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
Glyma.17G236200 No alias salt tolerance zinc finger 0.06 Orthogroups_2024-Update
MA_19127g0010 No alias (at1g02040 : 100.0) C2H2-type zinc finger family... 0.03 Orthogroups_2024-Update
MA_9316262g0010 No alias (at2g45120 : 86.3) C2H2-like zinc finger protein;... 0.03 Orthogroups_2024-Update
PSME_00015139-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00056793-RA No alias (at1g02040 : 87.8) C2H2-type zinc finger family protein;... 0.02 Orthogroups_2024-Update
Potri.001G224600 No alias C2H2 type zinc finger transcription factor family 0.03 Orthogroups_2024-Update
Potri.016G098100 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Pp1s286_28V6 No alias cys2 his2 zinc-finger transcription factor 0.06 Orthogroups_2024-Update
Seita.8G248000.1 No alias C2H2-type subclass ZAT transcription factor 0.05 Orthogroups_2024-Update
Sobic.002G359300.2 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Solyc06g075780 No alias Zinc finger, C2H2 (AHRD V3.3 *** A0A103Y6U7_CYNCS) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!