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  5. Seita.2G395600.1

Seita.2G395600.1


Description : Unknown function


Gene families : OG_42_0003080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G395600.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G077823 No alias ortholog of human splicing factor SC35 0.02 Orthogroups_2024-Update
HORVU2Hr1G029640.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g074040 No alias Serine/arginine rich splicing factor, putative (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 18 87
No external refs found!