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Description : Unknown function
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica: Seita.2G400300.1 | |
| Cluster | HCAA Clusters: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 173093 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| 26969 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| 424099 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| AC216235.2_FG010 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| At3g57430 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | Orthogroups_2024-Update | |
| Bradi1g60637 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi2g15700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi3g52870 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi5g12970 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.A00474.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Brara.A01120.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.E00200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.F01619.1 | No alias | RNA editing factor *(ECD1) | 0.03 | Orthogroups_2024-Update | |
| Brara.J01291.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.J01844.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G001466 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G022884 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G060536 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G084176 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G158839 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G165521 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G171994 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G332843 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.02G144100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.03G227900 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.07G159200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G286300 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.13G179700 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.16G049800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.17G175800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G079830.1 | No alias | RNA editing factor *(CLB19) | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g74600 | No alias | vegetative storage protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os06g02200 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os10g34720 | No alias | LOI1, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| PSME_00036492-RA | No alias | (at2g22070 : 524.0) pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
| Potri.001G243800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.015G018700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.016G053500 | No alias | mitochondrial RNAediting factor 1 | 0.03 | Orthogroups_2024-Update | |
| Potri.018G092400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Seita.1G311600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G001200.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
| Sobic.001G069300.2 | No alias | RNA editing factor *(DEK36) | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G149100.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Sobic.001G212200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G444200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G478900.2 | No alias | Unknown function | 0.07 | Orthogroups_2024-Update | |
| Sobic.002G111700.6 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.002G172500.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G200500.3 | No alias | Unknown function | 0.08 | Orthogroups_2024-Update | |
| Sobic.003G030100.1 | No alias | RNA editing factor *(CWM1) | 0.05 | Orthogroups_2024-Update | |
| Sobic.003G119100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G142400.2 | No alias | RNA editing factor *(PGN) | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G337200.1 | No alias | RNA editing factor *(MEF10) | 0.08 | Orthogroups_2024-Update | |
| Sobic.004G051600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G053100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G217900.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G266300.1 | No alias | Unknown function | 0.07 | Orthogroups_2024-Update | |
| Sobic.004G312000.1 | No alias | RNA editing factor *(CLB19) | 0.03 | Orthogroups_2024-Update | |
| Sobic.005G110550.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.006G146400.4 | No alias | RNA editing factor *(MEF12) | 0.07 | Orthogroups_2024-Update | |
| Sobic.007G208400.1 | No alias | RNA editing factor *(REME1) | 0.03 | Orthogroups_2024-Update | |
| Sobic.008G041000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.008G100400.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.008G147400.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G079400.1 | No alias | RNA editing factor *(ECD1) | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G116400.4 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G067000.1 | No alias | RNA editing factor *(MEF29) | 0.04 | Orthogroups_2024-Update | |
| Sobic.010G181000.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Sobic.010G189200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.010G190900.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Sobic.010G232700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc01g094850 | No alias | Pentatricopeptide repeat superfamily protein, putative... | 0.04 | Orthogroups_2024-Update | |
| Solyc02g079380 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.05 | Orthogroups_2024-Update | |
| Solyc02g093380 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc03g007840 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.03 | Orthogroups_2024-Update | |
| Solyc03g051780 | No alias | Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G57790.2) | 0.05 | Orthogroups_2024-Update | |
| Solyc03g097850 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
| Solyc03g116000 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc05g006800 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc06g066080 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.05 | Orthogroups_2024-Update | |
| Solyc07g042760 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.05 | Orthogroups_2024-Update | |
| Solyc11g007230 | No alias | LOW QUALITY:Pentatricopeptide repeat-containing protein... | 0.04 | Orthogroups_2024-Update | |
| Solyc11g008940 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Sopen01g002910 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
| Sopen01g041280 | No alias | PPR repeat family | 0.04 | Orthogroups_2024-Update | |
| Sopen01g054250 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
| Sopen02g033370 | No alias | PPR repeat family | 0.04 | Orthogroups_2024-Update | |
| Sopen03g028590 | No alias | PPR repeat family | 0.05 | Orthogroups_2024-Update | |
| Sopen03g034990 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
| Sopen04g008620 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
| Sopen05g002740 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen05g018650 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
| Sopen07g017190 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
| Sopen07g026910 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen09g033130 | No alias | PPR repeat family | 0.04 | Orthogroups_2024-Update | |
| Sopen11g029050 | No alias | PPR repeat family | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002097 | tRNA wobble base modification | IEP | Predicted GO |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Predicted GO |
| MF | GO:0003922 | GMP synthase (glutamine-hydrolyzing) activity | IEP | Predicted GO |
| BP | GO:0006177 | GMP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006298 | mismatch repair | IEP | Predicted GO |
| BP | GO:0006400 | tRNA modification | IEP | Predicted GO |
| BP | GO:0006553 | lysine metabolic process | IEP | Predicted GO |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | Predicted GO |
| BP | GO:0006664 | glycolipid metabolic process | IEP | Predicted GO |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0006783 | heme biosynthetic process | IEP | Predicted GO |
| BP | GO:0006784 | heme a biosynthetic process | IEP | Predicted GO |
| MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | Predicted GO |
| MF | GO:0008915 | lipid-A-disaccharide synthase activity | IEP | Predicted GO |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009085 | lysine biosynthetic process | IEP | Predicted GO |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Predicted GO |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0009163 | nucleoside biosynthetic process | IEP | Predicted GO |
| BP | GO:0009245 | lipid A biosynthetic process | IEP | Predicted GO |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Predicted GO |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predicted GO |
| MF | GO:0016653 | oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor | IEP | Predicted GO |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0030983 | mismatched DNA binding | IEP | Predicted GO |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Predicted GO |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predicted GO |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predicted GO |
| CC | GO:0033588 | Elongator holoenzyme complex | IEP | Predicted GO |
| BP | GO:0042168 | heme metabolic process | IEP | Predicted GO |
| BP | GO:0042278 | purine nucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
| BP | GO:0042451 | purine nucleoside biosynthetic process | IEP | Predicted GO |
| BP | GO:0042455 | ribonucleoside biosynthetic process | IEP | Predicted GO |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Predicted GO |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Predicted GO |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Predicted GO |
| BP | GO:0046037 | GMP metabolic process | IEP | Predicted GO |
| BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0046129 | purine ribonucleoside biosynthetic process | IEP | Predicted GO |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Predicted GO |
| BP | GO:0046160 | heme a metabolic process | IEP | Predicted GO |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | Predicted GO |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| BP | GO:0046493 | lipid A metabolic process | IEP | Predicted GO |
| BP | GO:0051186 | cofactor metabolic process | IEP | Predicted GO |
| BP | GO:0051188 | cofactor biosynthetic process | IEP | Predicted GO |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:1901070 | guanosine-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Predicted GO |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Predicted GO |
| BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | Predicted GO |
| BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Predicted GO |
| BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Predicted GO |
| No external refs found! |