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  5. Seita.2G410200.1

Seita.2G410200.1


Description : component *(MED26) of MEDIATOR transcription co-activator complex


Gene families : OG_42_0001427 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G410200.1
Cluster HCAA Clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
404483 No alias Transcription elongation factor (TFIIS) family protein 0.03 Orthogroups_2024-Update
GRMZM2G078563 No alias Transcription elongation factor (TFIIS) family protein 0.04 Orthogroups_2024-Update
Glyma.02G157800 No alias Transcription elongation factor (TFIIS) family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G064830.4 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.05 Orthogroups_2024-Update
HORVU2Hr1G025710.1 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.05 Orthogroups_2024-Update
LOC_Os03g24950 No alias expressed protein 0.06 Orthogroups_2024-Update
Sobic.001G361700.1 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.03 Orthogroups_2024-Update
Sobic.002G394400.1 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR017923 TFIIS_N 143 192
No external refs found!