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  5. Seita.2G419100.1

Seita.2G419100.1


Description : component *(CAP-D2A) of condensin I complex


Gene families : OG_42_0006125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G419100.1
Cluster HCAA Clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Brara.D00306.1 No alias component *(CAP-D2A) of condensin I complex 0.03 Orthogroups_2024-Update
MA_10427588g0010 No alias (at3g57060 : 577.0) binding; FUNCTIONS IN: binding;... 0.02 Orthogroups_2024-Update
Solyc10g079730 No alias Condensin complex subunit 1 (AHRD V3.3 *** K4D2L4_SOLLC) 0.02 Orthogroups_2024-Update
evm.model.tig00021070.119 No alias (at3g57060 : 155.0) binding; FUNCTIONS IN: binding;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
InterPro domains Description Start Stop
IPR024324 Condensin_cplx_su1_N 142 305
IPR032682 Cnd1_C 1025 1185
IPR026003 Cohesin_HEAT 477 495
No external refs found!