At4g17980

Description : NAC domain containing protein 71 [Source:TAIR;Acc:AT4G17980]

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At4g17980
Cluster	HCCA clusters: Cluster_197

Target	Alias	Description	ECC score	Gene Family Method
A4A49_10514	No alias	nac domain-containing protein 37	0.04	Orthogroups_2024-Update
At2g27300	No alias	NAC domain-containing protein 40...	0.06	Orthogroups_2024-Update
At3g04060	No alias	NAC domain-containing protein 46...	0.06	Orthogroups_2024-Update
At3g29035	No alias	NAC domain-containing protein 59...	0.03	Orthogroups_2024-Update
At3g61910	No alias	NAC domain-containing protein 66...	0.03	Orthogroups_2024-Update
Bradi1g17440	No alias	Arabidopsis NAC domain containing protein 87	0.02	Orthogroups_2024-Update
Bradi1g76732	No alias	vascular related NAC-domain protein 1	0.02	Orthogroups_2024-Update
Bradi5g16917	No alias	NAC 007	0.03	Orthogroups_2024-Update
Brara.A00921.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B01408.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B02268.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D01471.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G01307.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.J01823.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G406204	No alias	NAC domain containing protein 28	0.03	Orthogroups_2024-Update
Glyma.06G195500	No alias	NAC domain containing protein 100	0.03	Orthogroups_2024-Update
Glyma.16G042900	No alias	Arabidopsis NAC domain containing protein 87	0.03	Orthogroups_2024-Update
Glyma.16G217400	No alias	NAC domain containing protein 57	0.04	Orthogroups_2024-Update
LOC_Os07g48550	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g32260	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g38000	No alias	no apical meristem protein, putative, expressed	0.03	Orthogroups_2024-Update
Potri.002G005800	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Potri.005G116800	No alias	vascular related NAC-domain protein 1	0.04	Orthogroups_2024-Update
Potri.008G031800	No alias	NAC domain containing protein 2	0.03	Orthogroups_2024-Update
Potri.011G149300	No alias	NAC 014	0.03	Orthogroups_2024-Update
Potri.012G001400	No alias	NAC domain containing protein 100	0.03	Orthogroups_2024-Update
Potri.017G139500	No alias	NAC domain containing protein 28	0.05	Orthogroups_2024-Update
Sobic.002G290800.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G155100.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Solyc06g065410	No alias	NAC domain-containing protein, putative (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc06g074170	No alias	NAC domain protein, (AHRD V3.3 *** A0A061GVZ7_THECC)	0.04	Orthogroups_2024-Update
Solyc08g008660	No alias	NAC domain-containing protein, putative (AHRD V3.3 ***...	0.05	Orthogroups_2024-Update
Sopen06g029400	No alias	No apical meristem (NAM) protein	0.03	Orthogroups_2024-Update
Sopen08g025690	No alias	No apical meristem (NAM) protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Predicted GO
MF	GO:0004126	cytidine deaminase activity	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0006213	pyrimidine nucleoside metabolic process	IEP	Predicted GO
BP	GO:0006216	cytidine catabolic process	IEP	Predicted GO
BP	GO:0006497	protein lipidation	IEP	Predicted GO
BP	GO:0006505	GPI anchor metabolic process	IEP	Predicted GO
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Predicted GO
BP	GO:0006643	membrane lipid metabolic process	IEP	Predicted GO
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Predicted GO
BP	GO:0006664	glycolipid metabolic process	IEP	Predicted GO
BP	GO:0009119	ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0009164	nucleoside catabolic process	IEP	Predicted GO
BP	GO:0009247	glycolipid biosynthetic process	IEP	Predicted GO
BP	GO:0009972	cytidine deamination	IEP	Predicted GO
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Predicted GO
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0019239	deaminase activity	IEP	Predicted GO
BP	GO:0034656	nucleobase-containing small molecule catabolic process	IEP	Predicted GO
BP	GO:0042454	ribonucleoside catabolic process	IEP	Predicted GO
BP	GO:0044248	cellular catabolic process	IEP	Predicted GO
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Predicted GO
BP	GO:0046087	cytidine metabolic process	IEP	Predicted GO
BP	GO:0046131	pyrimidine ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0046133	pyrimidine ribonucleoside catabolic process	IEP	Predicted GO
BP	GO:0046135	pyrimidine nucleoside catabolic process	IEP	Predicted GO
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Predicted GO
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Predicted GO
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072529	pyrimidine-containing compound catabolic process	IEP	Predicted GO
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Predicted GO
BP	GO:1901658	glycosyl compound catabolic process	IEP	Predicted GO
BP	GO:1903509	liposaccharide metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	7	135

External Links

No external refs found!

At4g17980

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation