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  5. Seita.3G111900.1

Seita.3G111900.1


Description : subfamily ABCC transporter


Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G111900.1
Cluster HCAA Clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
90238 No alias multidrug resistance-associated protein 14 0.01 Orthogroups_2024-Update
At3g59140 No alias ABC transporter C family member 10... 0.03 Orthogroups_2024-Update
At3g62700 No alias ABC transporter C family member 14... 0.04 Orthogroups_2024-Update
Bradi2g12727 No alias multidrug resistance-associated protein 4 0.03 Orthogroups_2024-Update
Brara.F00437.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Glyma.05G145000 No alias multidrug resistance-associated protein 3 0.03 Orthogroups_2024-Update
Glyma.06G312300 No alias multidrug resistance-associated protein 1 0.03 Orthogroups_2024-Update
Glyma.16G172500 No alias multidrug resistance-associated protein 14 0.02 Orthogroups_2024-Update
HORVU4Hr1G084290.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
LOC_Os01g07870 No alias ABC transporter family protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00021000-RA No alias (at3g59140 : 1199.0) member of MRP subfamily; multidrug... 0.02 Orthogroups_2024-Update
Pp1s122_170V6 No alias multidrug resistance protein abc transporter family 0.02 Orthogroups_2024-Update
Sopen11g025470 No alias ABC transporter 0.03 Orthogroups_2024-Update
Sopen12g023190 No alias ABC transporter 0.02 Orthogroups_2024-Update
evm.model.contig_3396.7 No alias (at2g34660 : 863.0) encodes a multidrug... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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    • Type GO Term Name Evidence Source
    MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Predicted GO
    MF GO:0003883 CTP synthase activity IEP Predicted GO
    MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
    MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
    MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
    MF GO:0005253 anion channel activity IEPPredicted GO
    MF GO:0005254 chloride channel activity IEP Predicted GO
    BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
    BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
    BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
    BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
    BP GO:0006766 vitamin metabolic process IEP Predicted GO
    BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
    BP GO:0006821 chloride transport IEP Predicted GO
    MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
    MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
    BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
    BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
    MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
    MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
    BP GO:0015698 inorganic anion transport IEP Predicted GO
    BP GO:0015939 pantothenate metabolic process IEP Predicted GO
    BP GO:0015940 pantothenate biosynthetic process IEP Predicted GO
    MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
    MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
    MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
    MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
    BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
    MF GO:0022832 voltage-gated channel activity IEP Predicted GO
    BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
    BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
    MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
    BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
    BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
    BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO
    InterPro domains Description Start Stop
    IPR003439 ABC_transporter-like 604 738
    IPR003439 ABC_transporter-like 1217 1365
    IPR011527 ABC1_TM_dom 884 1149
    IPR011527 ABC1_TM_dom 309 539
    No external refs found!