1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.3G238400.1

Seita.3G238400.1


Description : Unknown function


Gene families : OG_42_0004263 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004263_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G238400.1
Cluster HCAA Clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Bradi2g57250 No alias Protein of unknown function, DUF647 0.03 Orthogroups_2024-Update
LOC_Os01g66350 No alias DUF647 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g34650 No alias DUF647 domain containing protein, putative, expressed 0.06 Orthogroups_2024-Update
Mp8g12970.1 No alias Protein root UVB sensitive 6 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Pp1s53_92V6 No alias emb1879 (embryo defective 1879) 0.02 Orthogroups_2024-Update
Sobic.003G381700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G140800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
evm.model.contig_2085.1 No alias (at3g45890 : 149.0) Encodes RUS1 (root UVB sensitive 1),... 0.01 Orthogroups_2024-Update
evm.model.tig00020675.83 No alias (at3g45890 : 173.0) Encodes RUS1 (root UVB sensitive 1),... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
InterPro domains Description Start Stop
IPR006968 RUS_fam 118 348
No external refs found!