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  5. Seita.3G391900.1

Seita.3G391900.1


Description : TCP-type transcription factor


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G391900.1
Cluster HCAA Clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
A4A49_18009 No alias transcription factor tcp4 0.03 Orthogroups_2024-Update
At3g15030 No alias TCP4 [Source:UniProtKB/TrEMBL;Acc:A0A178VD44] 0.03 Orthogroups_2024-Update
Bradi1g58450 No alias TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 0.02 Orthogroups_2024-Update
Brara.A03164.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.13G292500 No alias TCP family transcription factor 4 0.03 Orthogroups_2024-Update
Glyma.19G030900 No alias plastid transcription factor 1 0.04 Orthogroups_2024-Update
LOC_Os01g55100 No alias slTCP3, putative, expressed 0.03 Orthogroups_2024-Update
Potri.004G065800 No alias TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 0.02 Orthogroups_2024-Update
Potri.011G096600 No alias TCP family transcription factor 4 0.03 Orthogroups_2024-Update
Sopen06g026500 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update
Sopen12g005920 No alias TCP family transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 40 152
No external refs found!