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  5. Seita.3G397800.1

Seita.3G397800.1


Description : phytoene synthase *(PSY) & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group


Gene families : OG_42_0001912 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001912_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G397800.1
Cluster HCAA Clusters: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Bradi4g01100 No alias PHYTOENE SYNTHASE 0.04 Orthogroups_2024-Update
Glyma.02G240200 No alias PHYTOENE SYNTHASE 0.05 Orthogroups_2024-Update
Glyma.02G283400 No alias PHYTOENE SYNTHASE 0.03 Orthogroups_2024-Update
Glyma.08G306200 No alias PHYTOENE SYNTHASE 0.04 Orthogroups_2024-Update
Glyma.14G031200 No alias PHYTOENE SYNTHASE 0.03 Orthogroups_2024-Update
Glyma.14G209700 No alias PHYTOENE SYNTHASE 0.04 Orthogroups_2024-Update
LOC_Os06g51290 No alias phytoene synthase, chloroplast precursor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os12g43130 No alias phytoene synthase, chloroplast precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_86494g0010 No alias (at5g17230 : 553.0) Encodes phytoene synthase.; PHYTOENE... 0.02 Orthogroups_2024-Update
Potri.005G205800 No alias PHYTOENE SYNTHASE 0.03 Orthogroups_2024-Update
Pp1s323_70V6 No alias phytoene synthase 0.04 Orthogroups_2024-Update
Sobic.008G180800.1 No alias phytoene synthase *(PSY) & EC_2.5 transferase... 0.1 Orthogroups_2024-Update
Sobic.010G276400.2 No alias phytoene synthase *(PSY) & EC_2.5 transferase... 0.03 Orthogroups_2024-Update
Solyc02g081330 No alias phytoene synthase 2 0.05 Orthogroups_2024-Update
Sopen02g025960 No alias Squalene/phytoene synthase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Predicted GO
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006544 glycine metabolic process IEP Predicted GO
BP GO:0006546 glycine catabolic process IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009071 serine family amino acid catabolic process IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0042133 neurotransmitter metabolic process IEP Predicted GO
BP GO:0042135 neurotransmitter catabolic process IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002060 Squ/phyt_synthse 133 388
No external refs found!