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Description : starch synthase *(SS5)
Gene families : OG_42_0001050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001050_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica: Seita.4G007700.1 | |
| Cluster | HCAA Clusters: Cluster_260 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| PSME_00033669-RA | No alias | (q43846|ssy3_soltu : 375.0) Soluble starch synthase 3,... | 0.03 | Orthogroups_2024-Update | |
| Solyc02g091770 | No alias | Starch synthase, chloroplastic/amyloplastic (AHRD V3.3... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
| MF | GO:0003909 | DNA ligase activity | IEP | Predicted GO |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Predicted GO |
| BP | GO:0006310 | DNA recombination | IEP | Predicted GO |
| BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Predicted GO |
| MF | GO:0008531 | riboflavin kinase activity | IEP | Predicted GO |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Predicted GO |
| BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Predicted GO |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Predicted GO |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0042278 | purine nucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Predicted GO |
| MF | GO:0070403 | NAD+ binding | IEP | Predicted GO |
| BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Predicted GO |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013534 | Starch_synth_cat_dom | 118 | 316 |
| No external refs found! |